Company profile

Aignostics

Pathology & Laboratory Diagnostics

Company profile

About Aignostics

Aignostics is a Berlin and New York-based AI company transforming drug development and patient outcomes through advanced pathology analytics. As a spin-off from Charité Berlin, one of Europe's largest university hospitals, Aignostics has built industry-leading foundation models in collaboration with Mayo Clinic to analyze complex biomedical data at scale. The company's flagship product, Atlas H&E-TME, provides comprehensive tumor microenvironment profiling from H&E-stained whole slide images at single-cell resolution. Powered by Atlas 2, their latest foundation model co-developed with Mayo Clinic, the platform delivers over 4,500 quantitative metrics per image including cell detection and classification across 9 cell types, tissue segmentation into 7 regions, and spatial network analysis. The solution currently supports eight primary cancer types with validated performance on at least 90% of invasive morphological subtypes. Aignostics offers both products and custom services spanning target and biomarker discovery, translational research, and digital diagnostics. The company maintains proprietary access to pathology samples and multimodal data from over 30 million patients at leading university hospitals and laboratories. Their interdisciplinary team combines data scientists, machine learning engineers, pathologists, and biologists to deliver validated solutions for biopharma companies and academic researchers. The company is ISO 13485 and ISO 27001 certified with a GCP-ready clinical trial platform.

Company description Aignostics official website

Primary marketPathology & Laboratory Diagnostics
Commercial modelCommercial information available on request
Company presenceOfficial website
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01 · Operating footprint

Where the Company operates

Company-profile context for clinical focus, customers, deployment, integration, milestones, and partnerships.

Clinical focus

  • Eight primary cancer organ types
  • Lung squamous cell carcinoma (LUSC)
  • Oncology
  • Pancreatic cancer

Who it serves

  • Academic Researchers
  • Biopharma
  • Life Sciences Companies

Deployment & integration

Api Only · Cloud Saas · Hybrid deployment with recorded integration context.

Recorded integration context: IMS (Image Management Systems).

Geographic context

MarketsEurope · United States
Company sourceOfficial website

Company milestones

Platform expansion

January 2026: Announced Atlas 2 foundation model with Mayo Clinic setting new performance standards. June 2026: Partnership with Pancreatic Cancer Action Network. Quarterly rollout of new cancer types for Atlas H&E-TME. Launched OpenTME dataset with analyzed TCGA whole-slide images.

Partnerships

Recorded partners

  • Bayer (Target ID Platform)
  • Charité Berlin
  • Mayo Clinic (foundation model co-development)
  • Pancreatic Cancer Action Network

02 · Flagship portfolio

Products, workflows, and platform capabilities

Selected source-backed Company products and the available commercial context.

CARE Foundation Models

Industry-leading histopathology foundation model built with pathologists in-the-loop

Model · Api OnlyCompany source

Atlas H&E-TME

Comprehensive AI-powered tumor microenvironment analysis from H&E-stained whole slide images

Software · Cloud SaaSCompany source

Digital Diagnostics Services

Validation and refinement of AI models for prospective clinical use

Service · HybridCompany source

OpenTME

Fully analyzed TCGA whole-slide images for academic research

Platform · Cloud SaaSCompany source

Target & Biomarker Discovery Services

Multimodal AI platform for identifying novel drug targets and biomarkers

Service · HybridCompany source

Translational Research Services

Complex biomarker measurement and expression pattern prediction across data modalities

Service · HybridCompany source

03 · Research intelligence

Research Intelligence evidence

Publications, preprints, clinical validation, and regulatory records in Evidence Position order.

04 · Company-reported outcomes

Outcomes and case studies

Company-reported outcomes and customer stories are distinct from linked Research Intelligence evidence.

Performance matches or exceeds expert pathologists

Atlas H&E-TME tumor microenvironment analysis

Over 4,500 quantitative metrics per image

Comprehensive TME profiling

90%+ validation coverage

Invasive morphological subtypes per cancer type

Industry-leading performance across 80 public benchmarks

Atlas 2 foundation model

Pancreatic Cancer Action Network

Partnership to advance pancreatic cancer research

Mayo Clinic

Co-development of Atlas 2 foundation model for histopathology

Achieved industry-leading performance across 80 public benchmarks using 5.5M slides from 490k cases

Bayer

Validation of Target ID Platform for drug target discovery in lung squamous cell carcinoma

Independently rediscovered NRF2 pathway activation across DNA, RNA, and proteomics without prior knowledge of pathway biology during model training

05 · Leadership

Leadership team

Leadership profiles and professional links from the current Company record.

No active leadership profiles are currently listed.

06 · Company updates

Updates from Aignostics

Recent articles published on Aignostics's official website.

07 · HAIC coverage

Coverage and analysis

Health AI Central reporting that mentions this Company.

No HAIC coverage is currently linked to this Company.

08 · Official presence

Company sources and channels

Curated official destinations from the active Company record.

09 · Market pathway

Additional Companies in this Market

Other active Companies in the same market, selected alphabetically from the HAIC directory.

Market context

Pathology & Laboratory Diagnostics

Companies applying AI to digital pathology, histopathology slide analysis, laboratory diagnostics, or biomarker discovery. Includes AI-powered interpretation of lab test results, at-home diagnostic devices with AI analysis, and platforms that analyze tissue samples or biological specimens to support clinical diagnosis.

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10 · Pro research

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Expanded Company research is in development.

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Deeper Company research is coming soon.

Pro Research will introduce expanded technical context, linked evidence analysis, and comparative Company research.

ResearchEvidence analysis

Linked research, clinical, and regulatory source pathways.

CompanyTechnical context

Expanded product, deployment, integration, and partnership research.

MethodSource & review record

Record-level provenance and review context.

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