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Peer-Reviewed Publication
J Chem Inf Model2024;64(13):5028-5040.July 8, 2024Journal Article

Quantum-Informed Molecular Representation Learning Enhancing ADMET Property Prediction.

Jungwoo Kim1, Woojae Chang1, Hyunjun Ji1, InSuk Joung1
1Standigm Inc., 182 Dogok-ro, 6F, Gangnam-gu, Seoul 06261, Korea.

Abstract

We examined pretraining tasks leveraging abundant labeled data to effectively enhance molecular representation learning in downstream tasks, specifically emphasizing graph transformers to improve the prediction of ADMET properties. Our investigation revealed limitations in previous pretraining tasks and identified more meaningful training targets, ranging from 2D molecular descriptors to extensive…

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